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The car with problem is the GT350. Autoblip has been on for several events prior to the "misfires". Did have starting issues shortly after installing autoblip. Had all connections soldered-- still had problems. Ford replaced starter and that fixed problems. I, too, have suspicions about the autoblip but can't see how it could cause the misfire codes.
New engine is in. ECT is good and no misfires. I will be putting 1000 miles on it quickly in preparation for upcoming track days. Now have about 100 miles and so far, so good.